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Content about biology

May 1, 2013

Catherine Gater reports from the 5th CAPRI Evaluation Meeting in Utrecht, The Netherlands. The event focused on assessing and improving the performance of docking methods in predicting the 3D structure of protein complexes.

April 24, 2013

BioVeL is a European virtual e-laboratory that supports research on biodiversity issues using large amounts of data from cross-disciplinary sources. 

April 24, 2013

A chemical treatment that turns whole organs transparent, offers instant advances in the field of ‘connectomics’ — the push to map the brain’s wiring. Read about CLARITY, devised by Karl Deisseroth and his team at Stanford University in California, US.

April 10, 2013

The University of Texas at Austin and TACC competed against the top supercomputing centers and universities to claim one of the most advanced systems in the world — and won. The prize, an estimated $50 million-plus investment over a four-year period.

April 3, 2013

Find out how PRACE is helping researchers to simulate the movement of dinosaurs, including some of the very biggest animals to ever roam on land.

March 27, 2013

Pronto Diagnostics, a leading provider of molecular diagnostic products and services from Israel, is using distributed computing resources to improve DNA sequencing techniques. Thanks to the European Grid Infrastructure and Israel’s IsraGrid, it’s as easy as AGCT!

March 20, 2013

Faced with the daunting prospect of profiling the complexities of the immune system, researchers at Harvard Medical School/Business School enlisted the help of the world’s largest community of software experts on the site TopCoder.  A recent paper in Nature Biotechnology indicates a cultural shift in academia with experts engaging the collective skills of those outside their community, in order to help them overcome methodological barriers to their work.

March 20, 2013

With more than 10,000 species of birds known to exist, scientists know little about their diversity and development over time. Freely licensed software developed at the University of Utah, US, has enabled researchers to pinpoint a single gene responsible for some very glamorous hairdos.

March 20, 2013

Calling all citizen scientists. With the exploding availability of data, the need for analysis is steadily becoming a bottleneck in many scientific pursuits. Read about a project aimed at bringing neuroscience to the masses in a way that may surprise and inspire you to take part.

March 13, 2013

How do scientists use supercomputers to predict complex things like weather, climate, earthquakes, and the formation of galaxies? Watch this video to see how supercomputers handle mathematical modeling.

February 27, 2013

Using software to predict how proteins fold at the molecular level, scientists have discovered new information about misfolding and the submolecular level energies involved. Read about the open source software used for simulations, and the potential implications for treatment of degenerative diseases.

February 27, 2013

Researchers at the Mount Sinai School of Medicine use supercomputers to simulate important proteins and investigate how they interact with medication on a molecular level.

February 20, 2013

A new graph analytics appliance – Sherlock – is designed to speed up the modeling process and open doors to a wide range of scientific research. Launched in February, Sherlock will enable scientists and researchers to better understand the often hidden, complex relationships in big data.

January 30, 2013

North Atlantic right whales are among the most endangered whales in the world, with less than 500 individuals estimated to be alive today. Now, under-water robots are listening out for the whales' calls to help reduce the number of deaths caused by ship strikes.

January 30, 2013

Scientists in the US and France are gaining new insights into the genetic processes underlying brain development. The research has the potential to revolutionize the way mental disorders are both diagnosed and treated — and could have major repurcussions for the way drugs are designed in the future.

January 23, 2013

It may be named after a dying star, but the Helix Nebula project is very much alive. Now half way through its pilot phase, the project is moving ahead with new organizations coming on board.

January 23, 2013

Brazil has one of the highest levels of plant biodiversity in the world, but many local habitats are under pressure. Find out how the EUBrazilOpenBio project is using cloud computing to help conservation efforts in the region.

 

 

January 16, 2013

Variations in thickness cause the rainbow color in this ultra-stable glass. Image courtesy Mark Ediger.

December 12, 2012

To learn more about the integration of biological systems and pathologies, scientists look to multi-scale modeling to bridge the gap between molecular-, cellular-, and tissue-level information. Read about a new opportunity to advance discovery in these areas.

November 28, 2012

Due to the complexity of modern computational science, increasing software errors in code are causing the retraction of research papers in major journals. Now, the RunMyCode project offers a platform to reproduce a published paper's code and data that may be the key to not only reduce errors, but could open the door to better quality science across all research fields.

November 21, 2012

Extracting new knowledge from big data science is such a problem that projects are now underway which may transform research publishing and find relationships too complex for the human mind to see alone.

November 21, 2012

A monkey for a computer brain anyone? Image courtesy International Science & Engineering Visualization Challenge.

November 14, 2012

Researchers have discovered the mechanism of how a dangerous class of carcinogen stabilizes the very DNA it damages. This finding could lead to better preventative medicine and cancer treatment.

November 14, 2012

Are traditional journal subscriptions just too much? Image courtesy PhD comics.

November 14, 2012

The Sequoia supercomputer has simulated the human heart at an unprecedented scale, a breakthrough for the use of computational medicine by doctors to prevent sudden cardiac death.