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January 16, 2008

  Technology - XtreemOS: a Linux-based operating system to support next-generation grids At November’s SC07 conference XtreemOS was represented in the INRIA’s booth and also organized a well-attended Birds of a Feather session on grid operating systems.Image courtesy of XtreemOS While grids allow organizations to significantly increase their computational power, they can also threaten to be a significant headache. That’s where it can help to have an operating system designed to keep things simple. “Tools developed for grid use, like the Globus Toolkit, can be demanding and complex,” explains Christine Morin of INRIA Rennes Bretagne Atlantique in France, “especially because they are based on operating systems that are not designed to manage distributed and versatile resources.” Morin is the scientific coordinator of XtreemOS, a four-year research project that aims to develop a grid operating system to simplify the usage, management and programming of grids. “XtreemOS will pro

December 19, 2007

Announcement - Registration open: 3rd Grid and e-Collaboration Workshop for the Earth Science Community, 16-17 January, Italy The conference will be held at the European Space Agency Centre for Earth Observation: ESA-ESRINImage courtesy of ESARegistration is open for the third Grid and e-Collaboration Workshop for the Earth Science Community, to be held 16 and 17 January 2008 in Frascati, Italy.Abstract submissions are also invited. The conference will bring together large earth science data repositories and high-performance scientific data processing applications, and will be an opportunity to enable and support new collaborations between research projects and operational services providers.This year’s workshop focuses on data repositories, presenting updates on recent developments and reviewing and analyzing emerging community requirements.The workshop will bring together academic institutes and industry with the aim of developing a community view of challenges, working solutions and sustainability through the fostering o

December 19, 2007

Announcement - DEISA and GridAustralia demo HIV drug simulations over grids Prevalence of HIV among adults per country at the end of 2005.Images courtesy of WikipediaDEISA, the Distributed European Infrastructure for Supercomputing Applications, and GridAustralia-APAC, joined by Monash University, have demonstrated the interoperation of their HPC infrastructures with distributed simulations in both continents on the effectiveness of drugs against mutants of the Human Immunodeficiency Virus.Both DEISA and GridAustralia-APAC use different, incompatible underlying main middleware platforms; however, they were able to spread the compute tasks associated with HIV drug simulations over their different grids at a recent demonstrate at the SC07 conference in Nevada, U.S.The simulations aim to assess the drug-binding energies of anti-HIV drugs bound to HIV protease, including drug-resistant versions. It is hoped that this technique can give an accurate assessment of the likely effectiveness of each antiviral drug with respect to any given

December 19, 2007

  Feature - Behind the scenes with Mission Control: project managing massive grid projects Some of the faces that keep grid projects rolling ahead.Images courtesy of Open Science Grid and EGEEBehind every megabyte there is a mega-bit of teamwork.And behind every data delivery there is a project deliverable. Who coordinates these distributed computing projects, with their distributed partners and distributed priorities? iSGTW heads to Mission Control to find out. Chander Sehgal – Project Associate for Open Science Grid Anna Cook – Project Administration for Enabling Grids for E-sciencE   Chander Sehgal: “We have a shared mission, and that’s where the power of this collaboration comes from.”Images courtesy of Open Science Grid  Chander Sehgal – Open Science GridWhat is your role with OSG? I joined Open Science Grid in January 2007 and handle OSG’s project and budget management. We’re a medium-sized project employing several dozen people, and there are

December 19, 2007

  Feature - Grids don’t take vacation A big thanks to those who are giving up their time over the end of year break to keep grids all over the world on-line.Image adapted from SouthPole.com While the rest of us are on vacation, enjoying a snowy (or scorching) end of year break, the grids we depend on keep crunching through jobs, sending a stream of data around the world. In fact, the end of year break sees many grid services working harder than ever. How does it happen? iSGTW took time off from our own hectic holiday schedule to see what goes on while the users’ away. Nicholas Thackray – CERN grid services Frank Würthwein – Open Science Grid applications coordinator Nicholas Thackray – CERN grid servicesOur users rely on continual service, even when they’re away on vacation. If this stops working we’re going to have a queue of people at the door, all wanting to beat us over the head with a stick. Previously things were so brand new that it was difficult to have an emergency prese

December 12, 2007

Announcement - High Performance Computing and Grids, 30 June to 4 July 2008, Centraro, Italy The High Performance Computing and Grids workshop will discuss developments in HPC technologies and contribute to assessing the main aspects of grids, with special emphasis on solutions to grid computing deployment.Image courtesy of High Performance Computing and Grids The next High Performance Computing and Grids workshop will be held from 30 June to 4 July 2008 in Centraro, on the coast of southern Italy.The workshop will discuss developments in HPC technologies and contribute to assessing the main aspects of grids, with special emphasis on solutions to grid computing deployment.Topics will cover• Advanced Technologies for Petaflops Computing• Emerging Computer Architectures and Their Performance• Programming Models• Parallel Languages• Parallel Software Tools and Environments• Distributed Systems and Algorithms• Parallel Multimedia Computing Technologies• Innovative Applications in Science and In

December 12, 2007

Image of the week - DILIGENT crunches Flickr over EGEE The DILIGENT team used the EGEE computing grid to process 37 million images from the online Flickr database in just 16 weeks. Approximately 1,000 grid jobs were submitted per day, with each job processing around 1,000 images. Image courtesy of SAPIREver wished for a more reliable way of searching for images on the Web?  Grid-enabled digital library project DILIGENT has recently completed a data challenge on image feature extraction that has taken us one step closer to just that: next-generation image searching.Executed on the EGEE infrastructure, the recent DILIGENT challenge has created one of the world’s largest collections of multimedia metadata to be made publicly available for research purposes.37 million Flickr images in a flashThe DILIGENT team used the EGEE computing grid to process 37 million images from the online Flickr database in just 16 weeks. This computation generated approximately 112 million text and image objects—nearly 5 terabytes of

December 12, 2007

  Opinion - The rise of parallelism (and other computing challenges) The ILLIAC IV supercomputer led its field in 1966 as a parallel computing machine. This computer was only ever quarter finished, but took eleven years to build at nearly four times the original estimated cost.Image courtesy of Steve Jurvetson In the past, parallelism was just one solution among the many available to manufacturers wanting to propose computer architectures with attractive peak performances. Today, parallelism is no longer an “option”: it is now necessary for manufacturers to make large use of parallelism in order to propose attractive solutions.Parallelism is no longer devoted purely to the field of high performance or high speed computing. As a consequence, it is almost everywhere: parallelism is used in PCs, cellular phones and much more. The extensive use of parallelism has transformed “More than Moore” into reality, contributing to the sustained amazement of modern users of computer devices.The double-edges of the pa

December 5, 2007

Announcement - Call for participation: International Workshop on Campus Grids and Scientific Applications, 31 January to 1 February, Austria The workshop will have a special focus on application areas represented in the CPAMMS project, such as life sciences, quantum chemistry and molecular biology.Image courtesy of CPAMMSThe Research Lab Computational Technologies and Applications of the Faculty of Computer Science at the University of Vienna in cooperation with EGEE and the Research Focus “Computational Life Sciences” of the Faculty of Life Sciences and the University of Vienna are organizing an international workshop on Campus Grids and Scientific Applications. The workshop will be held in Vienna, Austria, from 31 January to 1 February 2008. Attendance is free of charge but anybody interested in participating is requested to register before January 10, 2008.The workshop provides a forum for presenting latest results and for discussing current developments and directions in all aspects of campus grids and scientifi

November 28, 2007

  Feature - Achieving interoperability between Shibboleth and gLite The Short Lived Credential Service allows users to access the grid with easy-to-use credentials.Image copyright Marcel Reich Grid security has long relied on public key infrastructure (PKI) technology, yet in recent years other security models have become widespread, most notably the concept of federated identity. Can these models achieve interoperability? Grid users are traditionally authenticated using X.509 certificates, which are issued by accredited Certification Authorities and are valid for one year. When interacting with grid services, these users typically present a short-lived proxy certificate, derived from this longer-lived X.509 certificate. In an environment based on federated identity, users identify themselves differently. This newer process comprises two clearly decoupled steps: authentication, which takes place at an Identity Provider; and authorization, which occurs at the Service Provider. Each Service Provider is free to decide whether to

November 28, 2007

  Feature - The path more travelled by: grids help track human migration Nicolas Ray uses Approximate Bayesian Computation—developed in 2002—to track the migration of humans through the centuries.Images courtesy of Rakesh Rampertab Today, families interested in an intercontinental move will probably go by plane, train or automobile. Several thousand years ago, adventurers had a harder time of it. Thanks to the plucky, pioneering efforts of early families, humans have managed to explore and settle every habitable region of the globe. Surviving the “bottlenecks” Two ancient migrations have particularly affected the shape of future generations: the “Out of Africa” event and the North to South colonization of the Americas. These migrations left traces in our genes still observable today. Described as “bottlenecks”—events where only a few individuals get through—the migrations may have caused a drastic reduction in population size and a corresponding drop

November 21, 2007

  Announcement - Registration open: 3rd EGEE User Forum, 11-14 February, France The Enabling Grids for EsciencE (EGEE) grid infrastructure is now operated by more than 90 partners spanning 45 countries. Image courtesy of EGEE Registration is now open for the 3rd EGEE User Forum, to be held in Clermont-Ferrand, France on 11-14 February 2008. Call for abstractsSubmitted abstracts should follow online guidelines and be submitted online. The deadline for abstract submission is 3 December 2007.Abstracts should address one of three general themes:scientific results produced with the help of grid technology, with emphasis on how grid technology enhanced the result,functional requirements for application porting and deployment, existing or prospective grid services, explaining the purpose, typical use cases and interactions with other grid services.Tutorials and TrainingsThose interested in organizing a tutorial or meeting in conjunction with the User Forum, should contact the Program and Local Organization Committee chairs. Tutor

November 21, 2007

  Image of the week - LHC data transport at SC07 From the SC07 exhibition floor: Rick Summerhill (left) and John Vollbrecht of Internet2 were part of the collaborative high-speed networking effort to move LHC data from Fermilab’s Tier-1 computer center to a Tier-2 infrastructure in the Caltech booth at SC07.Images courtesy of iSGTW The ultimate success of the Worldwide Large Hadron Collider (LHC) Computing Grid, and in turn of multi-billion dollar Large Hadron Collider, will heavily depend on an ability to move large volumes of data around the world at rates significantly in excess of 10 gigabits-per-second.Paving the way for this success is a collaboration of research and industry technology leaders, who combined forces at last week’s SC07 Conference in Reno, Nevada, U.S. to demonstrate their leading-edge capabilities in supporting the high-bandwidth needs of the worldwide research community. Each member of the collaboration—involving Caltech, ESnet, Fermilab, Infinera, Internet2, Juniper Networks and Le

November 21, 2007

Link of the week - Online learning: the International Winter School on Grid Computing The online International Winter School on Grid Computing requires 80 hours of commitment and is open to up to 30 participants. Applications are open now. This image comes from the summer school equivalent.Image courtesy of ICEAGE Can’t make it to the 2008 ICEAGE International Summer School on Grid Computing in Hungary in July? Why not study online instead? Enrolling in the summer school’s winter incarnation: the online International Winter School on Grid Computing, which kicks off 6 February 2008 and runs until 5 March. The International Summer Schools on Grid Computing—run by the ICEAGE project—were established in 2003 and have proven to be a great success, both for teaching staff and students. Introducing numerous grid technologies through lectures and practical exercises, the summer schools are a unique gathering place for globally recognised grid computing figures from all over the world. “[This sum

November 21, 2007

  Opinion - Anticipating futures: engineering expectations of ubiquitous computing In a 1996 presentation Mark Weiser predicted computing would become increasingly ubiquitous, disappearing “into the fabric of everyday life.” But ubicomp still has a long way to grow before living up to the trends predicted in this graph.Image © Mark Weiser/PARC Around twenty-five years ago, in an article for Scientific American, Mark Weiser laid out a lucid vision of computing in the 21st century. Central to this vision was the concept of “ubiquitous computing”: a radical proposal for spreading computers throughout our everyday environment.Weiser’s ideas, and his work at the Xerox Palo Alto Research Centre (PARC) in California, U.S., have since spawned an academic research agenda, in turn influencing innovative commercial research and development strategies.  But where is this so-called “ubicomp”? And what does it aim to achieve? Pencils and light bulbs: beyond desktop computingWhere the &ldqu

November 14, 2007

Announcement - 4th BELIEF brainstorming session: 26-27 November, Edinburgh, UK BELIEF, or Bringing Europe's eLectronic Infrastructures to Explanding Frontiers, will hold an invitation-only brainstorming session in Edinburgh this month. Expressions of interest in attending are now open.Image courtesy of Peter Tuffy, University of Edinburgh Persons interested in recieving an invitation to the fourth BELIEF Brainstorming event on e-Education and new e-Infrastructures Communities can now register their interest. The event will take place in Edinburgh, UK, from 26-27 November 2007 at the National E-Science Centre, in collaboration with High Throughput Computing Week. The BELIEF event will take advantage of its skilled and expert audience to examine e-education and how new community members can benefit from its use through developed infrastructures. The event will also highlight the diversity that einfrastructures can bring to e-education by showcasing practical examples. This outreach event, which looks to tap into re

November 14, 2007

Announcement - International Science Grid This Week celebrates one year iSGTW continues to cover the truly international effort behind grid computing.Image courtesy of GridPP, OSG and EGEEOn 14 November 2007 International Science Grid This Week will celebrate its one-year anniversary. Now with more than 3400 subscribers, iSGTW attracted over 70,000 visitors during October, an almost six-fold increase over the last six months. A collaboration between Open Science Grid in the U.S. and Enabling Grids for E-sciencE in Europe, iSGTW promotes the success of grid computing as a tool for scientists and researchers.Able to complete in minutes what might take an average PC many months, grid computing offers scientists a new level of computing power, allowing them to delve deeper in to research questions with big answers. Grid computing works by coordinating the power of ordinary computing resources, linking this power into massive multifunctional computing “grids.”Scientists are using grid computing to fight disease, develop n

November 14, 2007

  Images of the week - Scenes from SC07 Pumping at the pinnacle of energy, innovation and computing power, SC07 is serving up the latest and greatest in IT to a record crowd this week in Reno, Nevada.Image courtesy of Douglas Mansell The Stony Brook University team are all smiles just prior to beginning their 44-hour race against the clock and five other undergraduate teams as part of the Cluster Challenge.Image courtesy of Douglas Mansell The Enabling Grids for E-sciencE stand showcases the achievements of EGEE, a project which brings together partners from 45 countries to create a grid strongly focused on interoperability and accessibility.Image courtesy of Jerry Newton Photography The Fermilab team, members of Open Science Grid, are demonstrating high bandwidth Tier-1 to Tier-2 LHC data transmission. The OSG duck can be found on OSG member stands throughout the exhibition.Image courtesy of John Urish Projects including AstroGrid, OMII, National Grid Service, NaCTeM, the London e-Science Centre and GridPP are highl

November 14, 2007

Links of the week - The latest on the Large Hadron Collider The LHC project is the first large-scale scientific endeavor to depend on the success of grid computing for its own success. Screen shot courtesy of US/LHC The latest on the Large Hadron Collider—which is set to become the world’s most powerful particle accelerator when it starts up in 2008—is increasingly available in living rooms around the planet.LHC news, updates and resources are now available from an international trio of Web sites produced by CERN, the UK and the most recent, released last month by the U.S.You can also track the progress of the project using LHC milestones. Coming to proton-crunch time For more than a decade, an international team of thousands of scientists, engineers, technicians and students has been designing, constructing and assembling the 27-kilometer-long LHC and the four huge experiments it will host. Alongside this effort, a slightly smaller, but no less dedicated, team of computer scientists and computing-savvy phy

November 14, 2007

  Opinion - Celebrating one year of International Science Grid This Week iSGTW celebrates one year of reporting on grid computing initiatives across the globe. In the last six months, visits to the iSGTW Web site have increased almost six-fold and are continuing to rise. Images courtesy of iSGTWThis issue, International Science Grid This Week celebrates its first anniversary. Since our launch last year, interest in grids, cyberinfrastructure and distributed computing has skyrocketed. As one indicator, visits to the iSGTW.org site have increased almost six-fold over the last six months. The number of scientists using grid computing is also increasing, as is the level of resources now available to them.In the last year, the number of jobs run on the UK’s GridPP has more than doubled to approach one million jobs during October 2007. Altogether, in the last twelve months GridPP computers have run the equivalent of 26 million normalized CPU hours.The Open Science Grid e-infrastructure is now averaging 80,000 jobs a day&md

November 7, 2007

Announcement - OSG site administrators to discuss deployment of OSG 0.8.0 Fermilab, or the Fermi National Accelerator Laboratory, is a member of the OSG consortium and the venue for the December site administrators meeting.Image courtesy of FermilabOpen Science Grid site adminstrators will be meeting 12 and 13 December at Fermilab, Illinois, to discuss deployment of OSG 0.8.0 as well as to exchange experiences and challenges and plan for the second year of Open Science Grid.The program includes presentations from Rob Gardner of the University of Chicago, Tod Tanenbaum from the University of Wisconsin, Chris Green from Fermilab and Rob Quick from Indiana University.Anyone interested in deploying the OSG software or providing processing or storage resources for the OSG are welcomed to attend the meeting. Please contact OSG for more information. 

November 7, 2007

  Announcement - Royal request for time to kick-start Mediterranean e-infrastructures HRH Princess of Jordan Sumaya Bint Al Hassan (seated, front right) joined other VIP speakers and an invited audience at the EUMED Event in Brussels, 23-24 October.Image courtesy of TERENA News HRH Princess of Jordan Sumaya Bint Al Hassan added her voice to calls for a continuation of European funding support for vital Mediterranean e-infrastructures, during last month’s EUMED Event. The event, held in Brussels 23-24 October, brought together VIP speakers and an invited audience from around Europe and the Mediterranean region. Almost 90 politicians, network operators, users, civil servants, and managers of national research and education networks came from more than 15 countries to discuss collaborations in e-infrastructures and networking for research and education. Sustainability was the recurring concern of the event, with many questions about long-term support for projects that have been established across the Mediterranean region in

November 7, 2007

Announcement - New Internet2 IDEA award for revolutionary uses of advanced networking The “Wave of the Future” IDEA Award will recognize innovators who are developing and deploying advanced applications that require a dedicated optical circuit with capacities up to 10 gigabits per second.Image courtesy of Internet2Internet2 and Level 3 Communications have announced a new “Wave of the Future” category for the Internet2 Driving Exemplary Applications (IDEA) Awards program. The award will recognize innovators who are developing and deploying advanced applications that specifically require or make use of a dedicated optical circuit with capacities up to 10 gigabits per second.Open to existing or proposed applications, the Internet2 IDEA awards are designed to showcase projects that apply the latest in advanced networking capabilities to enable transformational progress in research, to enhance teaching and learning, and to potentially increase the impact of next-generation networks around the world.Through spo

November 7, 2007

  Feature - “CIC-On-Duty”: smooth operations behind the scenes Hélène Cordier presents at the Regional Operations Center Managers’ Meeting during EGEE ’07, speaking on developments in “CIC on Duty” operations.Image courtesy of Toth Csilla  As a grid user, you want to send jobs to your grid, and you want results back. Hélène Cordier is one of the hidden coordinators working behind-the-scenes to ensure this happens as smoothly and as often as possible.An integral part of operations in the Enabling Grids for E-sciencE project, Cordier is deputy of the French Regional Operations Center and also deals with French operations for the Large Hadron Collider Computing Grid. “CIC-On-Duty” Cordier has been the driving force behind “CIC-On-Duty,” where CIC stands for Core Infrastructure Center. Dubbed COD, Cordier’s scheme helps ensure smooth operation of the EGEE grid. All EGEE federations contribute one COD team of two to three people.&

November 7, 2007

  Feature - I’m being shadowed: voices from the GAP Eleven female staff from CERN’s IT department were kept under close surveillance yesterday, shadowed by female students from a local high school as part of the Enabling Grids for E-sciencE project. The Shadowing Day aimed to inspire young women into careers in information technology by passing on the message that careers in science are open to both men and women, and can be rewarding and fun.The students were given a tour of physics experiment ATLAS and the CERN Computer Centre, as well as the opportunity for one-on-one interaction with CERN IT staff.  Traditionally, fewer women work in the IT sector; women currently represent 21% of EGEE staff. The Shadowing Day was held as part of the EGEE Gender Action Plan, reflecting a commitment to reducing this gender gap. Other initiatives include the adoption of best practices and equal opportunity policies for EGEE and collaborating projects.iSGTW headed to CERN to hear from those involved in the Shadowing Day